Bacon was supporting in Mystic River and Beauty Shop. After that, the other films didn't really amount to much, if anything. Hell, he's uncredited in two of them.

From 90 to 00, he had

Hollow Man (2000) .... Sebastian Caine
My Dog Skip (2000) .... Jack Morris
Stir of Echoes (1999) .... Tom Witzky
Wild Things (1998) .... Sgt. Ray Duquette
Picture Perfect (1997) .... Sam Mayfair
Sleepers (1996) .... Sean Nokes
Apollo 13 (1995) .... Jack Swigert
Murder in the First (1995) .... Henri Young
The River Wild (1994) .... Wade
The Air Up There (1994) .... Jimmy Dolan
A Few Good Men (1992) .... Capt. Jack Ross
JFK (1991) .... Willie O'Keefe
He Said, She Said (1991) .... Dan Hanson
Flatliners (1990) .... David Labraccio
Tremors (1990) .... Valentine McKee

"Disappears" is an overstatement but after 2001 he hasn't exactly been in nearly as many mainstream films.